Jiaxing CHEN, Ph.D., is an accomplished researcher and educator with expertise in bioinformatics, machine learning, and algorithms. With a background in computer science, Jiaxing has made significant contributions to understanding complex biological systems through computational analysis. Jiaxing’s research focuses on omics-abundance, single-cell analysis, and spatial transcriptomics, aiming to unravel intricate biological processes at the molecular level. With a passion for teaching, Jiaxing has also imparted knowledge and mentored students in various computer science and bioinformatics courses.
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Jiaxing CHEN has established a strong presence in the academic community with a notable publication record and contributions to several high-impact journals. Their publications have garnered attention for their innovative approaches in bioinformatics and computational biology. Additionally, Jiaxing’s work has been cited by peers, indicating its relevance and impact within the scientific community.
Citations: Jiaxing CHEN has received a total of 291 citations across 287 documents, indicating the impact and recognition of their research within the academic community.
Documents: Jiaxing CHEN has authored 12 documents indexed in the database.
Education:
Jiaxing CHEN earned a Ph.D. in Computer Science from City University of Hong Kong, under the supervision of Prof. Shuaicheng Li. Prior to that, they completed a Bachelor of Engineering in Computer Science at Nankai University. Jiaxing also enriched their academic experience as a visiting scholar at UC Berkeley, collaborating with Prof. Steve Smale in the Department of Mathematics.
Research Focus:
Jiaxing CHEN’s research interests revolve around bioinformatics, machine learning, and algorithms. They are particularly interested in leveraging computational techniques to analyze omics-abundance data, single-cell gene expression, and spatial transcriptomics. By applying advanced computational methods, Jiaxing aims to elucidate complex biological phenomena and uncover novel insights into gene regulation and cellular behavior.
Professional Journey:
Jiaxing CHEN has embarked on a dynamic professional journey, starting as a Bioinformatics Analyst intern at BGI before pursuing a Ph.D. in Computer Science. Following their doctoral studies, Jiaxing served as a Postdoc in Computer Science at Hong Kong Baptist University before assuming the role of Assistant Professor at Beijing Normal University-Hong Kong Baptist University United International College. Throughout their career, Jiaxing has continuously contributed to cutting-edge research in bioinformatics and computational biology.
Honors & Awards:
Jiaxing CHEN has received recognition for their contributions to the field of bioinformatics and computational biology. They have been honored with prestigious awards such as the Young Scientists Fund of the National Natural Science Foundation of China (NSFC) for their outstanding research endeavors. Additionally, Jiaxing’s publications have been well-received, earning them accolades within the scientific community.
Publications Noted & Contributions:
Jiaxing CHEN has authored numerous impactful publications that have significantly advanced the field of bioinformatics. Their research spans a wide range of topics, including the reconstruction of gene regulatory networks, inference of direct regulatory interactions, and the analysis of gene expression profiles. Jiaxing’s contributions have shed light on key biological processes, such as horizontal gene transfer in gut microbiota and genetic differentiation in skeletal muscle.
On Triangle Inequalities of Correlation-based Distances for Gene Expression Profiles
- Authors: J Chen, YK Ng, L Lin, X Zhang, S Li
- Journal: BMC Bioinformatics
- Volume: 24
- Issue: 1
- Pages: 40
- Citation Count: 12
- Year: 2023
Association between Metabolic Status and Gut Microbiome in Obese Populations
- Authors: Q Zeng, Z Yang, F Wang, D Li, Y Liu, D Wang, X Zhao, Y Li, Y Wang, …
- Journal: Microbial Genomics
- Volume: 7
- Issue: 8
- Pages: 000639
- Citation Count: 11
- Year: 2021
dynDeepDRIM: A Dynamic Deep Learning Model to Infer Direct Regulatory Interactions Using Time-Course Single-Cell Gene Expression Data
- Authors: Y Xu, J Chen, A Lyu, WK Cheung, L Zhang
- Journal: Briefings in Bioinformatics
- Volume: 23
- Issue: 6
- Pages: bbac424
- Citation Count: 5
- Year: 2022
Both Simulation and Sequencing Data Reveal Coinfections with Multiple SARS-CoV-2 Variants in the COVID-19 Pandemic
- Authors: Y Li, Y Jiang, Z Li, Y Yu, J Chen, W Jia, YK Ng, F Ye, SC Li, B Shen
- Journal: Computational and Structural Biotechnology Journal
- Volume: 20
- Pages: 1389-1401
- Citation Count: 5
- Year: 2022
KDiamend: A Package for Detecting Key Drivers in a Molecular Ecological Network of Disease
- Authors: M Lyu, J Chen, Y Jiang, W Dong, Z Fang, S Li
- Journal: BMC Systems Biology
- Volume: 12
- Pages: 89-99
- Citation Count: 5
- Year: 2018
Research Timeline:
Jiaxing CHEN’s research trajectory showcases a continuous commitment to exploring innovative approaches in bioinformatics and computational biology. From their early experiences as a Bioinformatics Analyst intern to their current role as an Assistant Professor, Jiaxing has consistently pursued cutting-edge research projects aimed at unraveling the complexities of biological systems. Their research timeline reflects a passion for discovery and a dedication to advancing knowledge in the field.
Collaborations and Projects:
Jiaxing CHEN has collaborated with esteemed researchers and institutions on various interdisciplinary projects in bioinformatics and computational biology. Their collaborative efforts have resulted in impactful contributions to understanding gene regulatory networks, genetic variation, and microbial ecology. Through collaborative projects, Jiaxing has fostered connections within the scientific community and expanded the scope of their research endeavors.
